Book contents
- Frontmatter
- Contents
- Preface
- Nomenclature
- Introduction
- 1 Kinematics, Conservation Equations, and Boundary Conditions for Incompressible Flow
- 2 Unidirectional Flow
- 3 Hydraulic Circuit Analysis
- 4 Passive Scalar Transport: Dispersion, Patterning, and Mixing
- 5 Electrostatics and Electrodynamics
- 6 Electroosmosis
- 7 Potential Fluid Flow
- 8 Stokes Flow
- 9 The Diffuse Structure of the Electrical Double Layer
- 10 Zeta Potential in Microchannels
- 11 Species and Charge Transport
- 12 Microchip Chemical Separations
- 13 Particle Electrophoresis
- 14 DNA Transport and Analysis
- 15 Nanofluidics: Fluid and Current Flow in Molecular-Scale and Thick-EDL Systems
- 16 AC Electrokinetics and the Dynamics of Diffuse Charge
- 17 Particle and Droplet Actuation: Dielectrophoresis, Magnetophoresis, and Digital Microfluidics
- APPENDIX A Units and Fundamental Constants
- APPENDIX B Properties of Electrolyte Solutions
- APPENDIX C Coordinate Systems and Vector Calculus
- APPENDIX D Governing Equation Reference
- APPENDIX E Nondimensionalization and Characteristic Parameters
- APPENDIX F Multipolar Solutions to the Laplace and Stokes Equations
- APPENDIX G Complex Functions
- APPENDIX H Interaction Potentials: Atomistic Modeling of Solvents and Solutes
- Bibliography
- Index
14 - DNA Transport and Analysis
Published online by Cambridge University Press: 05 June 2012
- Frontmatter
- Contents
- Preface
- Nomenclature
- Introduction
- 1 Kinematics, Conservation Equations, and Boundary Conditions for Incompressible Flow
- 2 Unidirectional Flow
- 3 Hydraulic Circuit Analysis
- 4 Passive Scalar Transport: Dispersion, Patterning, and Mixing
- 5 Electrostatics and Electrodynamics
- 6 Electroosmosis
- 7 Potential Fluid Flow
- 8 Stokes Flow
- 9 The Diffuse Structure of the Electrical Double Layer
- 10 Zeta Potential in Microchannels
- 11 Species and Charge Transport
- 12 Microchip Chemical Separations
- 13 Particle Electrophoresis
- 14 DNA Transport and Analysis
- 15 Nanofluidics: Fluid and Current Flow in Molecular-Scale and Thick-EDL Systems
- 16 AC Electrokinetics and the Dynamics of Diffuse Charge
- 17 Particle and Droplet Actuation: Dielectrophoresis, Magnetophoresis, and Digital Microfluidics
- APPENDIX A Units and Fundamental Constants
- APPENDIX B Properties of Electrolyte Solutions
- APPENDIX C Coordinate Systems and Vector Calculus
- APPENDIX D Governing Equation Reference
- APPENDIX E Nondimensionalization and Characteristic Parameters
- APPENDIX F Multipolar Solutions to the Laplace and Stokes Equations
- APPENDIX G Complex Functions
- APPENDIX H Interaction Potentials: Atomistic Modeling of Solvents and Solutes
- Bibliography
- Index
Summary
Microdevices for analyzing deoxyribonucleic acid (DNA) are ubiquitous in biological analysis, and techniques for analyzing DNA in microchips pervade the analytical chemistry literature. Use of nanochannels to study polymer physics has also become common. Owing to DNA's huge biological importance, its chemical properties have been thoroughly studied, and the experimental tools available for chemical analysis of DNA are numerous. The ubiquity and convenience of DNA has also led to extensive study of its physical properties. DNA is therefore an excellent example of how microscale systems facilitate analysis, as well as a model system for examining the effect of nanostructured devices on molecular transport of linear polyelectrolytes. Because the chemistry for fluorescently labeling DNA is relatively inexpensive and available commercially, fluorescence microscopy of DNA is a widely used means for visualizing DNA. It is quite routine to fluorescently label and observe the gross morphology of a single DNA molecule with 1-µm resolution, and thus straightforward experiments can be brought to bear on questions of molecular configuration.
DNA (and other idealized linear polymers) behave physically somewhere in between small molecules (which behave like idealized points) and particles (which behave like rigid continuous solid phases). The behavior observed (and the models that describe this behavior) incorporates aspects of point and particle behavior, and these behaviors are different depending on the type of transport.
- Type
- Chapter
- Information
- Micro- and Nanoscale Fluid MechanicsTransport in Microfluidic Devices, pp. 298 - 335Publisher: Cambridge University PressPrint publication year: 2010