The protein Sex-lethal (SXL) controls dosage compensation in
Drosophila by inhibiting splicing and subsequently
translation of male-specific-lethal-2 (msl-2)
transcripts. We have previously shown that SXL blocks the binding
of U2 auxiliary factor (U2AF) to the polypyrimidine (Py)-tract
associated with the 3′ splice site of the regulated intron.
We now report that a second pyrimidine-rich sequence containing
11 consecutive uridines immediately downstream from the 5′
splice site is required for efficient splicing inhibition by
SXL. Psoralen-mediated crosslinking experiments suggest that
SXL binding to this uridine-rich sequence inhibits recognition
of the 5′ splice site by U1 snRNP in HeLa nuclear extracts.
We also show that SXL interferes with the binding of the protein
TIA-1 to the uridine-rich stretch. Because TIA-1 binding to
this sequence is necessary for U1 snRNP recruitment to
msl-2 5′ splice site and for splicing of this
pre-mRNA, we propose that SXL antagonizes TIA-1 activity and
thus prevents 5′ splice site recognition by U1 snRNP.
Taken together with previous data, we conclude that efficient
retention of msl-2 intron involves inhibition of early
recognition of both splice sites by SXL.